Insertion junction: CLIP2.003506_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003506
Chromosome:chromosome 16
Location:3687132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678808 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGGCTCCGCGTATGGCTTACCTTTGCGCTCTCTGCCCACCCGCCAC
Internal bar code:TGGGGTTTGGATCCCAGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAATACGGGAAGGGCAAGGG
Suggested primer 2:CAGCAGCACAATCAGCACTG