Insertion junction: CLIP2.003509_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003509
Chromosome:chromosome 8
Location:3125612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375950 EXR1 (1 of 1) PF13474 - SnoaL-like domain (SnoaL_3); UvrB containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGCTGGCGCGCCATCATGCGGAATGTGCGGCCGGGCGCCTTCAAGGT
Internal bar code:CACTTATCTGACACTGCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1170
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTATGCGTGCTAGCGA
Suggested primer 2:ATATGGGACTGGAGGGCTGT