Insertion junction: CLIP2.003513_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003513
Chromosome:chromosome 16
Location:1405619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652200 MMP9 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGTGAGGGCGAAGGTGACGGCCGGCGCGAGTGCTCTGTGTTTCAGGA
Internal bar code:ATCCCGTGTCACCGATCCACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5096
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACTTGCCAACACCTGC
Suggested primer 2:GTGATCTCCCCTCCTGACCT