Insertion junction: CLIP2.003514_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003514
Chromosome:chromosome 14
Location:1731265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619100 CLPR1 (1 of 2) PTHR10381//PTHR10381:SF18 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCCTGTGCGCCGCCACCCTGGCCACCTGCCCTTACGAATGCGCAGC
Internal bar code:GTAAGTACGACGTATGGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCGAGGAGGACTTGTTC
Suggested primer 2:AAGCGTAGTCCCGATGTGTG