Insertion junction: CLIP2.003516_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003516
Chromosome:chromosome 12
Location:4528806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521150 CGL19 (1 of 1) PTHR31089//PTHR31089:SF1 - FAMILY NOT NAMED // CYCLIC DOF FACTOR 4-RELATED; DOF type transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACAAACGGTCATAACTTTAGGACACTAAAGCAAAGACCCTAAGTAC
Internal bar code:GTTTTGTTAAAAACGGCTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2864
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGCAAAGTGACAACGTT
Suggested primer 2:AGGTACAATGGCTCACCTGC