Insertion junction: CLIP2.003519_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003519
Chromosome:chromosome 6
Location:5161354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283400 SPH2,CGL101 (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase; sucrose-phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGGGCTGGTGGTGGGTTGTTGTCGGGCGTGGTGGGGGGCGGCGGAGA
Internal bar code:AAAAATTCAACTGGCCCCTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1272
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCTGTTGAGGTCGATT
Suggested primer 2:GCTGGCTGCAGTTCAAGTTC