Insertion junction: CLIP2.003523_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003523
Chromosome:chromosome 3
Location:3812271
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g169900 (1 of 4) IPR023222 - PsbQ-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCAATTCTACTAAAACCGCCGCGGGACTGCGTTTTTTGCACACTTAT
Internal bar code:TGTGTGTATTCATTTAAAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1281
LEAP-Seq percent confirming:45.8333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCCCAGTCTACCAAAT
Suggested primer 2:CATCTGGGTTGGGGCTTGAT