Insertion junction: CLIP2.003533_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003533
Chromosome:chromosome 9
Location:4805391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402515 AMX1 (1 of 2) 1.4.3.21 - Primary-amine oxidase / Copper amine oxidase; Copper amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCCCACCTGCTTCACACGTGCAGGGGCGAGCCGGTGACGATCTCCA
Internal bar code:TTGGGCAGCCTCCGCTTTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGAGCTTGATGTCCAGT
Suggested primer 2:AGCCCCTCCGTACATGTAGT