Insertion junction: CLIP2.003537_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003537
Chromosome:chromosome 1
Location:2644652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015950 CPL11 (1 of 1) PTHR17490//PTHR17490:SF7 - SUA5 // SUBFAMILY NOT NAMED; translation factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCATGCCCGCAGGAGCCGCTCGTCGCCCAGACCTTGCCGGGCTCGA
Internal bar code:TCGAAGTCTTAGCTAGTGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1455
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GACACGCGGAGAGATGGTAG
Suggested primer 2:TGTGAGGCTGAGCAAGACAG