Insertion junction: CLIP2.003540_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003540
Chromosome:chromosome 7
Location:961997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319300 GWD1 Alpha-glucan water dikinase 1; (1 of 1) K08244 - alpha-glucan, water dikinase (E2.7.9.4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTAGCCGCCGGCTAGAGCCCCAGGCATGCCGTGGACTGAGCTCGCT
Internal bar code:CGTTACATGGTGCAGCGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCGTGTGGACCTGGTGA
Suggested primer 2:GTGCCGACGAGTCTAGAAGG