Insertion junction: CLIP2.003548_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003548
Chromosome:chromosome 11
Location:1221418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467689 PETC1,PETC (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC); Chloroplast cytochrome b6f Rieske iron-sulfur center subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCGATGGGACGTGGCACACCCAGCTGTTGTGCTCTAGGAAGACTGC
Internal bar code:TCTTAGTATCCTCCTGCAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2335
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGAGATGACAAGGGC
Suggested primer 2:TTGGTACATGGCGCTGATGT