Insertion junction: CLIP2.003557_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003557
Chromosome:chromosome 13
Location:2606884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580850 PRPL22 Chloroplast ribosomal protein L22/L18; (1 of 1) PTHR13501//PTHR13501:SF3 - CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAATAGTTATTTCTACTGGGAGGTCAAAATGGCCCTCCGTGCTTGC
Internal bar code:CTCTTACGTGAGACCGCTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAACTCCTCAGCTGCAA
Suggested primer 2:AACCTCACCATCACGCATGT