Insertion junction: CLIP2.003557_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003557
Chromosome:chromosome 13
Location:2606916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580850 PRPL22 Chloroplast ribosomal protein L22/L18; (1 of 1) PTHR13501//PTHR13501:SF3 - CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGACAAGGAGTTTGGGGGCCTGAACGTTTCCCCCATGCAAGTTGAC
Internal bar code:TATTCAAGGGCAGAGGCGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCACCATCACGCATGT
Suggested primer 2:CAGGAACTCCTCAGCTGCAA