Insertion junction: CLIP2.003558_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003558
Chromosome:chromosome 1
Location:8053875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g061077 CGL93 predicted protein; (1 of 1) PTHR31096//PTHR31096:SF14 - FAMILY NOT NAMED // ACT DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCAAGCGCCGCGCAGGTGGAGAAACGACGCATGCGGGATCGCTGCTT
Internal bar code:AGGAGTGCACGGTCTAACCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCTTGGAGAGCACTGT
Suggested primer 2:GTGCTTCGATGCGTACGAAC