Insertion junction: CLIP2.003559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003559
Chromosome:chromosome 3
Location:631710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145547 CBR1 (1 of 3) K00326 - cytochrome-b5 reductase (E1.6.2.2); NADH-cytochrome b5 reductase 3'UTR
Cre03.g145567 CGL18 Conserved in the Green Lineage; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCAATGGTATTCGTGAGAGAAGACTACCGTATATTTATGTAGCCGT
Internal bar code:TATATAAGGTTTCCGATTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGGGATGTTGCAGACT
Suggested primer 2:CGAGGACAAGCAGTTCCAGT