Insertion junction: CLIP2.003563_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003563
Chromosome:chromosome 16
Location:5712191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680800 CGL155 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGAGCATAACCCCGCCGCCCGTCGGCCCCCCAGCCGCCACCCCCAG
Internal bar code:GTTGTTGGGTACGGAGACGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTGCGAGTCAAGGAAT
Suggested primer 2:ATGATTGTCACCTCGCAGCA