Insertion junction: CLIP2.003566_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003566
Chromosome:chromosome 12
Location:2815230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503550 MEC1,MCS,MECPS1 2-C-methyl-D-erythritol 2%252C4-cyclodiphosphate synthase; (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGGCGTGGCTTCCACGCGGAGGGACGGGAGAGGGCAAAGTTGCTCG
Internal bar code:AGATTGAATGGTTACTTGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCTGATACCCAGCACC
Suggested primer 2:TGTTACAGTGTCGACCAGGC