Insertion junction: CLIP2.003571_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003571
Chromosome:chromosome 5
Location:546558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244450 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACATACATCCCACTCCGCTTCCGCCTTGTTCCACCTCCTAGGTCC
Internal bar code:TAACCTCTTAGCTGTGGGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:GCGCTCATCGTGCCTTTAAG