Insertion junction: CLIP2.003571_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003571
Chromosome:chromosome 5
Location:546572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244450 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTAAGCAGCGACGGAAGATGCAACATGGGCCCGTGCATGATGATGTG
Internal bar code:GGTAGCCCAGTTGTTGCTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTCATCGTGCCTTTAAG
Suggested primer 2:ATGAAGTGAAGTGCCGACGT