Insertion junction: CLIP2.003579_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003579
Chromosome:chromosome 16
Location:7953013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690879 FAP173 (1 of 1) PTHR10264//PTHR10264:SF84 - BAND 7 PROTEIN-RELATED // HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2; Flagellar Associated Protein 173 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACCTGGGGAAGCTGCAGGCCCGACATCTGCCACGTCTCTCGCACCC
Internal bar code:TATAAGAGTGTGGAACGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGGAAGATGAGCGCGA
Suggested primer 2:GCAACCTTTGACACAGCAGG