Insertion junction: CLIP2.003579_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003579
Chromosome:chromosome 16
Location:7953014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690879 FAP173 (1 of 1) PTHR10264//PTHR10264:SF84 - BAND 7 PROTEIN-RELATED // HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2; Flagellar Associated Protein 173 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAAAGAGCGCCCTGCACCCAGCCCTTGCCCCACCCCAGACCACACCC
Internal bar code:GTCAAGTTGTAATACAGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3932
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCTTTGACACAGCAGG
Suggested primer 2:GAGATGGAAGATGAGCGCGA