Insertion junction: CLIP2.003582_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003582
Chromosome:chromosome 5
Location:2408617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238500 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGATCAGGGCGGCACAGGAAGGCACGGCACGGGCGCCGAGAGCGTG
Internal bar code:ATTGGCTCCTTCGCTAATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGTGTGCAGCTTTGGAC
Suggested primer 2:CAAACGCCCTTCCCTTGTTG