Insertion junction: CLIP2.003583_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003583
Chromosome:chromosome 14
Location:1487071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617600 DEG9 Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTTGCGCACCTTGCCGTCGCACACCACCTCTGCCTTGAACTTGCGCG
Internal bar code:TTACTAAAGGCGAATGGGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1628
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGGTCCTTCAGGCTGTG
Suggested primer 2:CAAGCCTCAGTAGCGGTCAA