Insertion junction: CLIP2.003585_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003585
Chromosome:chromosome 7
Location:3291870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334550 PSAO,PSAO1 Photosystem I reaction center subunit O; (1 of 1) K14332 - photosystem I subunit PsaO (psaO) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCAGATGACTTTGGCCGGGCTCCCAAAGCGCTTGCATCGGCGCTCGA
Internal bar code:TAGTACCATCCCCTCCAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1044
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTACCTACTCAGTGCGCG
Suggested primer 2:GTTCTCGCCGATAGACTGGG