Insertion junction: CLIP2.003593_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003593
Chromosome:chromosome 12
Location:7680060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555100 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGTAGAAGGCCCAAGCGACCGGGTTTAGAACCTGGGATTGAGAAAA
Internal bar code:GCAATCGGAAGCACCCGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1573
LEAP-Seq percent confirming:61.3636
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCTGCTGAAACTTTGGC
Suggested primer 2:TTCGACCTGGTTTCGACCTG