Insertion junction: CLIP2.003601_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003601
Chromosome:chromosome 2
Location:4972737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110500 (1 of 10) IPR004087//IPR004088 - K Homology domain // K Homology domain, type 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTACATGGTCATGTGTTTAAAGTGACAATGTCCAGTGAGCCTTCTGTC
Internal bar code:TTCGATCGAGCCGCACAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2447
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCTTGCTAAGGTGTGAG
Suggested primer 2:TGTCGTCATATCGCGGACTG