Insertion junction: CLIP2.003601_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003601
Chromosome:chromosome 2
Location:4972742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110500 (1 of 10) IPR004087//IPR004088 - K Homology domain // K Homology domain, type 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCGAGTAGCAGAAAATGCTTGAAAAAACGCAACACGCACAAGCGAA
Internal bar code:TTCGATCGAGCCGCACAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4541
LEAP-Seq percent confirming:98.9362
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCGTCATATCGCGGACTG
Suggested primer 2:TGGGCTTGCTAAGGTGTGAG