Insertion junction: CLIP2.003602_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003602
Chromosome:chromosome 12
Location:3572199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGAGGAGGAGGTCATACCCGCAAGGCGCGGCGTGGCGGGTGCGCGG
Internal bar code:GTGGGGATCGATTGAGTCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1445
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCAGCTGCCTGACACA
Suggested primer 2:CGCTCAAGCCCTGGTCTTAA