Insertion junction: CLIP2.003606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003606
Chromosome:chromosome 13
Location:1907118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575850 (1 of 10) PF13460 - NAD(P)H-binding (NAD_binding_10) 3'UTR
Cre13.g575900 CGL117 (1 of 1) PF04959//PF12066 - Arsenite-resistance protein 2 (ARS2) // Domain of unknown function (DUF3546) (DUF3546); predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTGAGAGCACCGGACGGGATAGGACCCATAGGACTCGACTTACGTAT
Internal bar code:ACCAATAGGACGGATAGTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3884
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGTGAGTACCATACGG
Suggested primer 2:CGGAATGCGCGAGTACTTTG