Insertion junction: CLIP2.003616_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003616
Chromosome:chromosome 3
Location:1471660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151400 (1 of 1) K05643 - ATP-binding cassette, subfamily A (ABC1), member 3 (ABCA3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACCCAATGCAATGGAGCGAGGAGGAGAGCGTGGCAGGTGGGGGTGG
Internal bar code:TACGGCTGGCCTGGCACATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTCTTCAACCTGCTGC
Suggested primer 2:AGTAGGAGGCCTCACTCAGG