Insertion junction: CLIP2.003619_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003619
Chromosome:chromosome 7
Location:1701194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325711 (1 of 2) K19363 - lipopolysaccharide-induced tumor necrosis factor-alpha factor (LITAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTAGCCCATCACATGCAACTGACCCCCTGTAACGCACCGCCGCCAC
Internal bar code:GGGTGTTCGGTAGCAGTCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3032
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTGTATCGCCCTAGCCG
Suggested primer 2:CTGCCACATTCGTGCTATGC