Insertion junction: CLIP2.003620_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003620
Chromosome:chromosome 3
Location:6838482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197450 (1 of 1) PTHR10799:SF676 - WINGED HELIX DNA-BINDING DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCGGGCCTCGAGAGACGCTTCGACTGCATGCCCTGCTGTCCCAGTCC
Internal bar code:TTAAGGTTCCGAGAAATATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1509
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTGGGCTTGATGTCT
Suggested primer 2:ATCCCAGATCCGGAACCTCA