Insertion junction: CLIP2.003631_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003631
Chromosome:chromosome 2
Location:5707349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116250 (1 of 1) PTHR28055//PTHR28055:SF1 - FAMILY NOT NAMED // ALTERED INHERITANCE OF MITOCHONDRIA PROTEIN 41, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCAAACTGATTTCTGCAGCACACGGGAATCACTTTGTGGAACAAAA
Internal bar code:CCTCCCCCTAGGAGCGTAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCACAGCAGCGTATTCG
Suggested primer 2:CTTGCTCCCAGGCATGAAGA