Insertion junction: CLIP2.003647_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003647
Chromosome:chromosome 3
Location:1472813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151400 (1 of 1) K05643 - ATP-binding cassette, subfamily A (ABC1), member 3 (ABCA3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTAAAAACCCCCTCCCTTCCCCCCATGTGGTAATGACTTCGTCTGCG
Internal bar code:CAAGTGGGGCCGCCAGTAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCCCTCTCCTGTGTGTG
Suggested primer 2:TTGCTCTTTTCGCAACTGCC