Insertion junction: CLIP2.003655_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003655
Chromosome:chromosome 12
Location:6275949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536500 CGL10 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGAGAGCTCACAGCGTCAAGAATATGCCATTGTTGATGCCGGGGGG
Internal bar code:TGATGATTTCAAGAGGGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2304
LEAP-Seq percent confirming:99.0566
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGCGATGTTGCTGCTAG
Suggested primer 2:CAATGGGGTGGTGCTGTTTG