Insertion junction: CLIP2.003661_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003661
Chromosome:chromosome 9
Location:4047943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398919 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTCCCACGCACTCCACCCGACGGGCTGTGACACCTGCCGTCAACAC
Internal bar code:CGGTCCGCTAATCACGAAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3637
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCTTCTTAGGACAACCG
Suggested primer 2:ACTGATTGACTCGTGGCGTT