Insertion junction: CLIP2.003667_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003667
Chromosome:chromosome 14
Location:700087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g612450 PRPL15 (1 of 1) PTHR12934//PTHR12934:SF11 - 50S RIBOSOMAL PROTEIN L15 // 50S RIBOSOMAL PROTEIN L15, CHLOROPLASTIC; Chloroplast ribosomal protein L15 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTGTGCGTGTCTGCCACCCATGCCCGCGACACGAGTCACGCGCGCG
Internal bar code:GGGAACTGGTCGGGGACTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCCTTCCTGTATTTGT
Suggested primer 2:GCAAACTCACCAGGGCTTTG