Insertion junction: CLIP2.003671_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003671
Chromosome:chromosome 12
Location:7655668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555400 CGLD32 Conserved in the Green Lineage and Diatoms; (1 of 1) PF10693 - Protein of unknown function (DUF2499) (DUF2499) outside_mRNA
Cre12.g555450 PMK,IPK,IMPK (1 of 1) 2.7.1.140 - Inositol-tetrakisphosphate 5-kinase / 1D-myo-inositol-tetrakisphosphate 5-kinase; inositol-tetrakisphosphate 5-kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCAGTGTCGTAGCTCGGAACTACTGATGAAGTGATCGTGATCGGTG
Internal bar code:ACTACTGGGGAAATATTAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3612
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTCCGGTACACAGTGA
Suggested primer 2:TGCAACTCCCTGGACAATCC