Insertion junction: CLIP2.003672_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003672
Chromosome:chromosome 13
Location:2941631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583600 DGD1 Digalactosyldiacylglycerol synthase; (1 of 1) 2.4.1.241 - Digalactosyldiacylglycerol synthase / UDP-galactose:MGDG galactosyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCACACGAAAGGATCAAAGTAAATGACGCGCCCCTCGGCCACACGCC
Internal bar code:TTGATAACGTAGTAAATTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2199
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTAATCCGTCTCGACTG
Suggested primer 2:AAGCAAACACGCACATGGAC