Insertion junction: CLIP2.003678_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003678
Chromosome:chromosome 6
Location:2821628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271950 CGL135,GC6 (1 of 1) PTHR10013 - GENERAL VESICULAR TRANSPORT FACTOR P115; Conserved in the green lineage 135 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCTCGGTGTACATCGGAGTGGTTTCAACCACCCCACTGGGGACTGG
Internal bar code:GTCACTGTAATTGTGCAAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACAAAAGCGAA
Suggested primer 2:GTCCTGCATGCTTCCTTCCT