Insertion junction: CLIP2.003683_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003683
Chromosome:chromosome 3
Location:8800138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206929 RSE4,EGY1 (1 of 1) PTHR31412:SF0 - ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED; membrane associated metalloprotease involved in chloroplast development 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTTCCCACGTCGCTTCCGATGCAACACCGCATAGCAGACGCAACTG
Internal bar code:GTTTAGTCGAATTTTCGGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2909
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTAACATTCTGAGCGCGG
Suggested primer 2:ACGCGTCGACAACTTCTTCT