Insertion junction: CLIP2.003684_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003684
Chromosome:chromosome 2
Location:8351911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142800 CITRX,TRXZ,TRX13,TRXZ1 Thioredoxin z, chloroplastic; (1 of 1) PTHR10438//PTHR10438:SF276 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CITRX, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTTGCCCGCGTGGGCTGCACGGGCTGCGGCGCCGTGTCTGCGCGAC
Internal bar code:TCGGTTGAAAGGTCCCATCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTCCCCCTCTACTGCT
Suggested primer 2:GCAGGTGGAGAAGATCTCGG