Insertion junction: CLIP2.003689_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003689
Chromosome:chromosome 6
Location:1914765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264300 PRPS15 (1 of 2) IPR005290 - Ribosomal protein S15, bacterial-type; Chloroplast ribosomal protein S15 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGACTGAAGCACGCCTAGCAGGCCTCCTGCTGCCACGACGTCCGT
Internal bar code:AAATGGATTGTGCTGTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGCGCCCAATAAATGT
Suggested primer 2:AAGCAGCAATGCAACAAGGG