Insertion junction: CLIP2.003695_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003695
Chromosome:chromosome 16
Location:2474763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660390 CSR1 (1 of 1) PF00415//PF00685 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Sulfotransferase domain (Sulfotransfer_1); Carbohydrate sulfotransferase-related 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACCAAAGCGAACCCAATCCAAAAGAGCGAGGAAGGGACGAGAAGT
Internal bar code:CTCCATCATGAGTCTAGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTTCAGAAGGCGCGTTGT
Suggested primer 2:ACCTTCTGTATATGCGCCCG