Insertion junction: CLIP2.003695_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003695
Chromosome:chromosome 16
Location:2474764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660390 CSR1 (1 of 1) PF00415//PF00685 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Sulfotransferase domain (Sulfotransfer_1); Carbohydrate sulfotransferase-related 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGTATCAACAACCCTCCCTTCCTCTCTTCCCTTCCCTTTCCCTCCCT
Internal bar code:CTCCATCATGAGTCTAGATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:969
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCTGTATATGCGCCCG
Suggested primer 2:TAGTTCAGAAGGCGCGTTGT