Insertion junction: CLIP2.003697_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003697
Chromosome:chromosome 2
Location:4376414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCCGCTCCCGCGCCCCCTTCCTGGTCCTGCTCCTGCTTCACCTCCGG
Internal bar code:CCACATTTAAGTGCCGCTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4224
LEAP-Seq percent confirming:98.9691
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CACACATGCGTTGACCGTTT
Suggested primer 2:ATGAGGGTGAGGGAGCAGAT