Insertion junction: CLIP2.003697_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003697
Chromosome:chromosome 2
Location:4376432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTCGGGCCCGATGCGGCTGCGCCGCAGCTTCCGCAGGAGCCGGAAG
Internal bar code:CCACATTTAAGTGCCGCTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1018
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGGGTGAGGGAGCAGAT
Suggested primer 2:CACACATGCGTTGACCGTTT