Insertion junction: CLIP2.003698_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003698
Chromosome:chromosome 3
Location:7299901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207000 (1 of 1) PTHR34543:SF1 - ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGTGATTCACACCCGCGCCGAACCCAGCTCGTCTCAACATGCCCT
Internal bar code:GCTAAGGGAGGGTAGTCGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGGGCGCTTATACTCC
Suggested primer 2:AGCGTGGCAGTCTCGAATAG