Insertion junction: CLIP2.003698_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003698
Chromosome:chromosome 3
Location:7299903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207000 (1 of 1) PTHR34543:SF1 - ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGACGGGAGTTCAATGACGAATAGAGAGACGGCGGCTACCTGAACA
Internal bar code:GCTAAGGGAGGGTAGTCGTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3203
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGGCAGTCTCGAATAG
Suggested primer 2:GATGGGGGCGCTTATACTCC