Insertion junction: CLIP2.003701_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003701
Chromosome:chromosome 2
Location:3599019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099601 (1 of 4) PF01342 - SAND domain (SAND) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGCAGCTGCTGCTGCAGCAGCAACTGCAGCCGGTGCCGCCGGACCA
Internal bar code:GTTTGACCCATGCCGGTATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1370
LEAP-Seq percent confirming:74.2857
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAATGCACTAGGTCCAGT
Suggested primer 2:GCTTCCTATGGTCTCGGACG